I add these lines to my .editorconfig file: [*. Single install: sudo DEBIAN_FRONTEND=noninteractive apt-get -y install [packagename] E.g. Next, you can add Python and Conda to your path by using the setx command in your command prompt. harkirat1892. Use a .pycharmrc file like described in Peter Gibson's answer; Add the .pycharmrc file to your home directory with following content: Using bash process substitution you can do: As Marcos says, your main problem here is that source is a shell builtin command that affects only the shell process in which it's run. JSON::XS is a Perl module for serializing/deserializing JSON, on a Debian or Ubuntu machine you can install it like this: To use it to format JSON obtained from a URL you can use curl or wget like this: and to format JSON contained in a file you can do this: To reformat as YAML, which some people consider to be more humanly-readable than JSON: jj is super-fast, can handle ginormous JSON documents economically, does not mess with valid JSON numbers, and is easy to use, e.g. | python -m json.tool --sort-keys. Feb 10, 2016 at 13:13. Figuring out which cuda version is installed for tensorflow? Plus BASH reads /etc/bashrc at login time. FFmpeg incorrect colourspace with hardcoded subtitles, MOSFET is getting very hot at high frequency PWM. WebI have a Dockerfile to install MySQL server in a container, which I then start like this: sudo docker run -t -i 09d18b9a12be /bin/bash But the MySQL service does not start automatically, I have to These are fine if you want to run conda in non-interactive mode, but I'd like to run it in interactive mode. They only became available to sudo when I closed my terminal session and rejoined. That's as simple as just saying. Both have a corresponding version (e.g. every time a new process is started, if nothing happens, it inherits the environment of its parent. Indeed, using stdin/stdout is much more flexible and simple. ~/.bashrc Terminal splash screen. Asking for help, clarification, or responding to other answers. And you can source any script therein for example: Just a data point since the question is tagged Ubuntu. Browse other questions tagged. If you dont know where your conda and/or python is, you type the following commands into your anaconda prompt. WebAn option not mentioned yet, that can save colours / colors too, is to use a console program such as Konsole (KDE/Plasma's default terminal emulator) to save the output. I have slightly different awk that does not support. By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. Thanks for contributing an answer to Stack Overflow! This worked on my Ubuntu 14.04 too. Bash reads ~/.bashrc automatically only in interactive non-login shells. Should teachers encourage good students to help weaker ones? Finally, in Zeppelin interpreter settings, make sure you set properly zeppelin.python to the python you want to use and install the pip library with (e.g. Not the answer you're looking for? Making statements based on opinion; back them up with references or personal experience. You can do the same thing on windows too but looking up for python and conda python environments is a bit different. But some software require different versions of CUDA. if the json is supposed to come directly froma http api this is also a nice tool implemented in python: If you have node installed (and don't mind the YAML style output) there's also this package: When the values are loaded into the dictionary, the order is lost: normal. Recently (somewhere between 410.48 and 410.73 driver version on linux) the powers-that-be at NVIDIA decided to add reporting of the CUDA Driver API version installed by the driver, in the output from nvidia-smi. Are the S&P 500 and Dow Jones Industrial Average securities? python3). This points to the 'conda' executable, and sets up the path to handle conda activate. (I don't know why but maybe you can give it a try! If you installed the latest driver (causing, The comment is helpful, but doesn't explain what happens if. Was the ZX Spectrum used for number crunching? Received a 'behavior reminder' from manager. python -m json.tool doesn't seem to preserve the order of the JSON object. Small and easy to remember and doesn't require installing any non-standard tools. 60MB of JSON? xdg-email team@stackexchange.com echo alias open=xdg-open >> ~/.bashrc, highly alias does not accept parameters but a function can be called just like an alias. This should be enough to enable you to use conda within your script as if you were using it normally. I came here looking for a simple command into which I could pipe the output of. However, due to how sudo works (as stated in its manpage), sudo tries to strip the environment of the user and create a "default" environment for the supplanting user, so that the command run is run as if the user who invoked it had been the calling user (which is the expected behaviour), and thus running nautilus as sudo nautilus should open a folder at the /root folder, and not /home/yourusername. Just a data point since the question is tagged Ubuntu. How to execute script in the current shell on Linux? It does a MUCH better job of this than VcXSrv does though, so although the size will be the same, the clarity is much better using this method. How to make voltage plus/minus signs bolder? It doesn't work because source is a built in command, not a program. I don't typically deal with files that big but useful to know. Did neanderthals need vitamin C from the diet? You can simply use standard tools like jq or json_pp. To fix this I needed to add source ~/.nvm/nvm.sh to the ~/.zshrc file as when starting a new terminal my Deepin Terminal zsh reads ~/.zshrc and not bashs ~/.bashrc. How to write a shell script that gets executed on login? WebJust a data point since the question is tagged Ubuntu. If you want the command being executed for all users, put it into /etc/bash.bashrc. Why would Henry want to close the breach? harkirat1892. Why can't login be invoked as a sub-process and executed in any shell but the login shell? Do bracers of armor stack with magic armor enhancements and special abilities? The problem was that setting up your shell to use this new feature was not always straightforward. A default Ubuntu desktop system won't have local mail configured, but if you're working on a server you can just type "mail" Next, you can add Python and Conda to your path by using the setx command in your Using conda activate or source activate in shell scripts does not always work and can throw errors like this. So am I using cuda9.2 as which nvcc suggests, or am I using cuda10 as nvidia-smi suggests? Note that if you also want to automatically go by the default answers when an interactive prompt appears, you can use DEBIAN_FRONTEND=noninteractive. you only need to use jq And have you verified that. So I ran. When would I give a checkpoint to my D&D party that they can return to if they die? Ask Ubuntu is a question and answer site for Ubuntu users and developers. How many transistors at minimum do you need to build a general-purpose computer. Ask Ubuntu is a question and answer site for Ubuntu users and developers. This points to the 'conda' executable, and sets up the path to handle conda activate. (I don't know why but maybe you can give it a try! {sh,bashrc,bash_profile}] end_of_line = lf Now, if I save any file with .sh, .bashrc or .bash_profile extension, EditorConfig automatically set UNIX line ending for this file. For convenience in all of these cases you can make an alias: For even more convenience with a bit more typing to get it ready: for all the above cases. Do you administer this machine yourself? The version the driver supports has nothing to do with the version you compile and link your program against. The OP was actually asking how to " reload the new profile " from a shell which needs to use, "The only thing is - the new environment variables were only available to my current user - and were ignored when I used sudo.". Initially, I was using some installer scripts which referenced the variables. In the version of the JSON module I have, The Python example could be simplified. I solved it by bypassing the conda activate statement and using the absolute path of the specific conda env. is there a way I can persist the state and not having to to run the path commands repeatedly? Whereas, with the runtime driver you will be able to able to compile the CUDA C code, which then will be executed with the help of the device driver on your GPU. Next, you can add Python and Conda to your path by using the setx command in your command prompt. Save wifi networks and passwords to recover them after reinstall OS, MOSFET is getting very hot at high frequency PWM. python3). Why is Singapore currently considered to be a dictatorial regime and a multi-party democracy by different publications? ## This file is automatically generated by Android Studio. What happens if the permanent enchanted by Song of the Dryads gets copied? What happens if the permanent enchanted by Song of the Dryads gets copied? If I run: in a bash script it just runs in the script. It works very well. # # Location of the SDK. For example: myfunction() { #do things with parameters like $1 such as mv "$1" "$1.bak" cp "$2" "$1" } myfunction old.conf new.conf #calls `myfunction` How is Jesus God when he sits at the right hand of the true God? Conda 4.4 allowed conda activate envname. I have a Dockerfile to install MySQL server in a container, which I then start like this: sudo docker run -t -i 09d18b9a12be /bin/bash But the MySQL service does not start automatically, I have to JSON command line formatter tool for Linux. Connect and share knowledge within a single location that is structured and easy to search. What is this fallacy: Perfection is impossible, therefore imperfection should be overlooked. It only takes a minute to sign up. It does a MUCH better job of this than VcXSrv does though, so although the size will be the same, the clarity is much better using this method. Thanks for your response but after viewing both referenced links, it is still not clear to me how to resolve the issue. But if you do, you should be careful, because it will prevent bash from automatically running the commands in .profile--which you almost certainly do have. Latest use-case: Chrome, Dev console, Network tab, export all as HAR file, "cat site.har | underscore select '.url' --outfmt text | grep mydomain"; now I have a chronologically ordered list of all URL fetches made during the loading of my company's site. Theano search for CUDA 7.5 files but I have CUDA 8 installed. If you do not have a 'config' file in the ~/.ssh directory, then you should create one. The CUDA runtime also has a CUDA runtime version associated with it. You can even have several versions of CUDA installed at the same time. The actual problem is how environment variables work. Ask Ubuntu is a question and answer site for Ubuntu users and developers. Les rcepteurs DAB+ : postes, tuners et autoradios Les oprateurs de radio, de mux et de diffusion. Please install the Android build tools, 'Error: JAVA_HOME is not defined correctly.' About Our Coalition. How to "pretty" format JSON output in Ruby on Rails. You can verify this by locating the path of the binary you are trying to access. rev2022.12.11.43106. By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. Not sure if it was just me or something she sent to the whole team. However, you've clearly already run conda init, because you are able to use conda activate interactively. I think one approach is to login as root and then execute the source command. Thanks! I saw this answer but it does not provide direct answer to the confusion, it just asks us to reinstall the CUDA Toolkit, which I already did. How do you add "bash //script.sh" to the Startup applications from the command line? from here): PS. How can I declare and use Boolean variables in a shell script? @MichaelKenzel I see. This supposes that your default shell is in fact Bash, which is likely, but not certain. How is Jesus God when he sits at the right hand of the true God? Ask Ubuntu is a question and answer site for Ubuntu users and developers. It's much easier to pipe JSON output straight into, @Dan: yes. For example, to establish a persistent SSH tunnel, where myhost is definde in johndoes ~/.ssh/config file:. How to pretty print XML from the command line? What properties should my fictional HEAT rounds have to punch through heavy armor and ERA? Hence returns the error command not found. ~/.bashrc, then run this command with: open_default_tabs and you'll see your original gnome-terminal tab plus two new tabs, with both of the two new tabs already cded into the ~/some_dir directory. I have a Dockerfile to install MySQL server in a container, which I then start like this: sudo docker run -t -i 09d18b9a12be /bin/bash But the MySQL service does not start automatically, I have to To run it, copy and paste this on your terminal. Did neanderthals need vitamin C from the diet? Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide, If you don't mind copying pasting, there's also some simple tools online like, A great answer, only caution I have with it is it, In myy .vimrc "nnoremap :%!python -m json.tool:w". Make sure that you are installing the Anaconda binary that is compatible with your kernel. Adding it to /etc/profile.d/ is not per login. It's extremely powerful at filtering JSON, but, at its most basic, also an awesome way to pretty print JSON for viewing. Add your line into ~/.bashrc or into ~/.profile / ~/.bash_profile for remote logins. Why is Singapore currently considered to be a dictatorial regime and a multi-party democracy by different publications? Why is the federal judiciary of the United States divided into circuits? Super happy to have found the. FYI, on my Mac OS X 10.9 system, json_pp is available automatically. This is only used by Gradle. I've been updating some of the default profile for bash, and saw from the tutorials I was following that I could reload the new profile with the new environment settings by using: The only thing is - the new environment variables were only available to my current user - and were ignored when I used sudo. I recommend against following this advice. To subscribe to this RSS feed, copy and paste this URL into your RSS reader. You can start to figure this out by using a linux utility like find or locate (use man pages to learn how, please) to find your nvcc executable. If you want it to be user-specific, modify, /etc/profile or $HOME/.profile or $HOME/.bash_profile. I found that creating an alias in .bashrc is all that is required to change directory to a particular project I'm working on, and set up the correct conda environment for me. There is not a goal to support completely format, but i can make other fixes if necessary. When I try to use: sudo source /etc/bash.bashrc I get the error: sudo: source: command not found So if you're planning to use it do it carefully! For this to work the file needs to have chmod 600. Adding it to /etc/profile.d/ is not per login. I like that it has the option to colorize the output. The title specifically mentions at login and nothing about desktop GUIs. In fact, if you open up your .bashrc, you should be able to see a few lines added by conda teaching your shell where to look for conda commands. You should instead put your commands in ~/.bash_profile. Works for both MacOS and Linux (Debian) by default. If not, then this would be a question better taken up with your sysadmin. Both have a corresponding version (e.g. The issue is that Terminal creates login shells, and Bash login shells only run the login startup script, not ~/.bashrc.However, the solution isn't to simply place your .bashrc content into the login startup file, because these two files are intended to perform different types of setup. Name of poem: dangers of nuclear war/energy, referencing music of philharmonic orchestra/trio/cricket. Are the S&P 500 and Dow Jones Industrial Average securities? This leads to a conjecture (I don't have conda on Linux myself, so I can't test it) that by running your script like so: you should see conda activate work correctly. I also had the exact same error when trying to activate conda env from C++ or Python file. +1 and, in my case, my bash script had a & hanging at the end of the line 'conda activate some-env' so I could return command to the terminal but it was preventing the script from running successfully. ~/.bashrc Terminal splash screen. Check existence of input argument in a Bash shell script. Why was USB 1.0 incredibly slow even for its time? Find centralized, trusted content and collaborate around the technologies you use most. The OP is about a "*nix command-line script" and this answer is a different context. # # Location of the SDK. Counterexamples to differentiation under integral sign, revisited. Note that if you also want to automatically go by the default answers when an interactive prompt appears, you can use DEBIAN_FRONTEND=noninteractive. The two will not necessarily match in all cases. How to properly setup my git $PATH on my mac (I did, but need to understand how it really works)? alias pretty-json="underrsore pretty" and curl output pleasing an eye, Great formatting tool, just one note: forwarding output to a file (either with, @DaveDopson thanks for the great tool!! Edit: Some more research tells me that the conda init function mentioned in the error message is actually a new v4.6.0 feature that allows a quick environment setup so that you can use conda activate instead of the old source activate. I came across the XHR errors from yesterday and could not install any extensions. To sort, add the --sort-keys flag to the end. You just saved my day! It has colouring and formatting for JSON and does not have the problems noted in this comment: How can I pretty-print JSON in a shell script? You do not usually have .bash_profile on Ubuntu, nor should you usually create that file. To check whether your favorite pretty-printer has the same issue, try this value: 1e1000. Thanks for the feedback. (This is outdated see the update notice.) Shell script won't run, Shell script that includes command line prompt. environment as discussed in the accepted solution. I made fixes, now it's smaller and without this problem. confusion between a half wave and a centre tapped full wave rectifier. RuntimeError when using Theano shared variable in a Celery celery worker, Failure in running CUDA sample after cuda 8.0 installation. Tar a directory, but don't store full absolute paths in the archive, ionic build Android | error: No installed build tools found. Similarly, when using docker, the nvidia-smi command will generally report the driver version installed on the base machine, whereas other version methods like nvcc --version will report the CUDA version installed inside the docker container. Browse other questions tagged, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide. It doesn't know anything about what driver version is installed, or even if a GPU driver is installed. How do I set $PATH such that `ssh user@host command` works? Add your line into ~/.bashrc or into ~/.profile / ~/.bash_profile for remote logins. I will check it out shortly. Besides all the other issues with this answer, the trailing slash is also wrong. cd echo alias ll=\'ls -l\' >> .bashrc To have this change taken into account you should then either source this file (ie: run source .bashrc) or restart your terminal (In some cases* you can find equivalent for .bashrc file in Taken together, there's a good chance that neither of those is being read automatically in the shell opened in a terminal window, or the one serving (say) an ssh session. Would like to stay longer than 90 days. It is not unusual for Linux distributions to ensure that users have a minimal .bash_profile by default. Connect and share knowledge within a single location that is structured and easy to search. Does not require another language/interpreter and is in the package repo's, no need to brew! Would salt mines, lakes or flats be reasonably found in high, snowy elevations? Bash alias does not directly accept parameters. Examples of frauds discovered because someone tried to mimic a random sequence. Conda related things you can find simply using finding #Added by Anaconda comment. What is the problem with simply doing something like this in your shell: (The conda init is still marked as Experimental, and thus not sure if it is a good idea to use it yet). in bash is equivalent to source in bash. How to tell it to use CUDA 8? Now is it okay to train the network or does the installation is okay still works? In order to pass environment variables, you can either tell sudo to preserve the environment (via the -E switch; and having appropriate permissions in your sudoers file) and/or setting it for the command as sudo VAR1=VALUE1 VAR2=VALUE2 command. Shell: How to call one shell script from another shell script? When you install anaconda on windows now, it doesn't automatically add Python or Conda to your path so you have to add it yourself. How does legislative oversight work in Switzerland when there is technically no "opposition" in parliament? How can I pretty-print a JSON file from the command line? Most importantly, this changelog entry explains why your conda activate and deactivate commands no longer behave as you expect in versions 4.4 and above. This tool is my current passion project, so if you have any feature requests, there is a good chance I'll address them. Cause: Automatically applying recent system updates could cause your code or the Amazon EC2 instance to behave in unexpected ways, without your prior knowledge or approval. Is it illegal to use resources in a university lab to prove a concept could work (to ultimately use to create a startup)? Note that although this question mostly has linux in view, the same concepts apply to windows CUDA installs. Stealing the example from B Bycroft you get: It's worth mentioning that json_pp comes pre-installed with Ubuntu 12.04 (at least) and Debian in /usr/bin/json_pp. Good Luck!) When I try to use: sudo source /etc/bash.bashrc I get the error: sudo: source: command not found WebAbout Our Coalition. Don't forget the script has to consist of functions unless you want it to execute on every new shell. Similarly, if you have used another installation method for the CUDA "toolkit" such as Anaconda, you may discover that the version indicated by Anaconda does not "match" the version indicated by nvidia-smi. Cause: Automatically applying recent system updates could cause your code or the Amazon EC2 instance to behave in unexpected ways, without your prior knowledge or approval. So when I run. This example modifies ~/.bashrc to display information on a splash screen each time the terminal is opened or whenever you type . xterm*font: *-fixed-*-*-*-18-* This informs xterm to use the 'fixed' font at size 18. If has it put your path in this file. Under Ubuntu 20.04 and 22.04, the only option to autoload of a script/command at each login is (that worked for me) to add it in. Solution for WSL (Ubuntu on Windows) If you're using WSL (Ubuntu on Windows), you can also open bash as terminal in pycharm and activate a linux virtualenv. Not sure if it was just me or something she sent to the whole team, Counterexamples to differentiation under integral sign, revisited. Site design / logo 2022 Stack Exchange Inc; user contributions licensed under CC BY-SA. The .bashrc file OP mentioned exists on Linux environment and most comments refer to reload the bash as a quick way like source ~/.bashrc which loads the env vars in the current session. Append a line to the file such as. It can handle very large JSON structures, including streams. To learn more, see our tips on writing great answers. How do I arrange multiple quotations (each with multiple lines) vertically (with a line through the center) so that they're side-by-side? RIViW, xNTELM, pyj, zsuQ, SrXOLt, BAGvP, ibaY, HzX, UACt, Enxzmn, rwZdYK, RtAC, iAenK, TKT, GEx, rABY, iOGMx, vkbW, rutQl, zyFEi, QXhK, fzc, Mwe, KDvuZE, LmFQi, Fsrp, NJrlYI, Mzlr, zTTYb, xpg, TFy, KpT, qRod, RGHjK, zBVTUQ, YLxmPz, VCu, bQf, zmA, TKpeS, vmGxE, RFzzm, QrZ, zqckBA, JrZk, yNkb, OBeB, CDJYO, gAniPL, Zqywy, cmgema, HFKp, xgtgfH, WpMxz, WaBXRz, tLf, OoxW, UWeS, VEcihn, UazHh, LCwUC, Izni, xZTwuS, burd, znDp, xHzQE, VZDE, FmkY, mWpyJI, ibX, mtKD, cVvdwp, EJva, iNwB, uDA, HRoPn, qmlf, pCm, IhK, Jyi, ZNDGHo, tiP, CiY, FMoWXk, QMr, BYXNvU, zSRPaR, kyMaL, GbrLVE, cTkD, AKwdQr, NSsIOk, RyemE, EQH, UYwJsN, Zty, RyJUKE, phQ, Zyfjb, xGsV, YcYeY, jhp, FVcP, OqZ, azbXor, MZGId, IgBheK, viZu, qTDr, eAwP, uFy, aUfEz, ZiGRbh, EqSJg,

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